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Chapter 10 |
phosphorylation that controls the enzyme. The nitrated enzyme, in endothelial cells, is dysfunctional and causes the blood-brain barrier to leak.
Hydrogen peroxide quickly passes through membranes and within minutes causes DNA to fragment (Figure 10.1). Hydrogen peroxide may form a hydroxyl radical that rapidly breaks DNA. DNA fragmentation occurs through three mechanisms: cleavage of the deoxyribose radical, Criegee rearrangement and peroxide migration. Radical cleavage involves cleavage of a negatively charged phosphate moiety leaving a positively charged deoxyribose radical. Criegee rearrangement involves hydroxide attack of the deoxyribose with elimination of a negatively charged phosphate moiety. Peroxide migration involves elimination of an uncharged phosphate moiety with ring opening of the deoxyribose. Of course, radical oxidation of DNA bases can also occur. DNA peroxidation and cleavage leads to activation of PARP that activates
PO |
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HOO
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Figure 10.1
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DNA peroxidation and cleavage by oxygen radicals. B is any DNA base. PO is phosphate in the DNA structure. DNA cleavage occurs through three mechanisms: cleavage of the deoxyribose radical, Criegee rearrangement and peroxide migration.
DNA, Nuclear Cell Signaling and Neurodegeneration |
181 |
DNA repair enzymes.69 PARP uses NAD as an energy source and as a substrate to poly(ADP-ribosylate) itself and several nuclear enzymes. This poly(ADP-ribosylation) alters the activities of many enzymes.
Neuronal DNA is much more than just an archive of genetic information. It is very actively involved in producing proteins for neurotransmitter synthesis, release, reuptake and other neuronal functions. Damage to neuronal DNA very extensively a ects the ability of neurons to function normally, including maintaining neurotransmitters.70
PARP may ADP-ribosylate various transcription factors that regulate gene transcription.71,72 PARP is a component of positive cofactor 1 activity that regulates class II gene transcription.70 When DNA is damaged, PARP is activated, which inhibits class II gene transcription regulated by RNA polymerase II.73 PARP is also important in the action of p53, the tumor suppressor protein. Both PARP and p53 bind to DNA breaks. PARP can form complexes with p53 that may alter the activity of p53.74 Interestingly, p53 is involved in the inhibition of RNA polymerase III dependent gene transcription.75
It is important to recognize that the PARP referred to above is PARP-1. There are several enzymes with PARP activity.76 It is not known if the other enzymes, PARP-2, PARP-3, tankyrase and V-PARP, can fill in for PARP-1 when PARP inhibitors are used. Clearly, in PARP-1 knockout mice, the other PARP enzymes are still functional and can protect DNA and synthesize poly(ADP-ribose). It is also not known if PARP inhibitors are specific for PARP-1 or can inhibit all forms of PARP.
The energetic consequences of DNA damage and PARP activation are
enormous (Figure 10.2). PARP activation rapidly depletes NAD and ATP levels in the cell, leaving the cell depleted of energy sources.69,77 NADPH
depletion also occurs.77 Glutathione oxidizes. Glycolysis, the pentose phosphate pathway and mitochondrial energetics are a ected.
Recent research indicates that the secondary brain injury associated with stroke is induced by inflammatory processes. Nicotinamide can decrease the recruitment of neutrophils to potential sites of inflammation by inhibiting PARP in neutrophils and other cells.78 In fact, nicotinamide has been recommended for the treatment of arthritic patients since the 1940s. It was found in pilot trails that nicotinamide improved joint mobility and decreased the need for anti-inflammatory medication in arthritic cases.79 In the process of inflammation, the genes for intercellular adhesion molecule 1 and collagenase in neutrophils are activated. Neutrophils are recruited to sites of inflammation. Nitric oxide synthase is activated and oxygen radicals, hydrogen peroxide and nitric oxide are released. These reactive species can damage cellular DNA in the area of inflammation, resulting in apoptosis, necrosis and more serious inflammation.80 PARP has a number of functions in inflammation due to its ability to regulate gene expression.80 Inhibition by nicotinamide of PARP leads to decreased expression of these genes and decreases the extent and severity of inflammation. Nicotinamide also decreases the induction of iNOS, thereby decreasing damage to the blood-brain barrier.81
182 Chapter 10
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Figure 10.2 The energetic consequences of DNA damage caused by oxidative stress. PARP is poly(ADP-ribose) polymerase. NAM is nicotinamide. NMN is nicotinamide mononucleotide. Na is niacin. Na-MN is niacin mononucleotide. Na-AD is niacin adenine dinucleotide. 1 is nicotinamide phosphoribosyl transferase, which requires ATP. 2 is NMN adenyl transferase, which requires ATP. PPP is the pentose phosphate pathway. G-6-P is glucose-6-phosphate. R-5-P is ribose-5-phosphate. G-3-P is 3-phosphoglycerate.
DNA damage leads to cell death. A large amount of DNA fragmentation causes rapid necrosis, with cell swelling and rupture, nuclear swelling and rupture and cytoplasmic vacuole formation. A smaller amount of DNA fragmentation causes apoptosis with cell shrinkage, nuclear condensation and fragmentation, large vacuole formation in the cytoplasm and cell fragmentation forming apoptotic bodies.82 Necrosis is a rapid process that does not require energy. Apoptosis is a delayed process that requires ATP. The center of a brain infarction is typically made up of necrotic cell debris.83 The limit area surrounding the core contains necrotic, apoptotic and normal cells.83
DNA, Nuclear Cell Signaling and Neurodegeneration |
183 |
10.4 Gene Transcription and DNA Damage
A very useful model for DNA damage in the brain is the tertiary-butylhy- droperoxide (tBuOOH) model.84,85 Following intracerebroventricular injection of tBuOOH, DNA fragments within minutes followed by apoptosis and necrosis of many cells in the brain.70 DNA fragmentation and PARP activation lead to changes in gene expression within 1 hour or more (Table 10.1).86 Most of the genes are involved in apoptosis. Reactive oxygen species, such as hydrogen peroxide, at the cell surface activate TNFR that activates caspases 3, 6, 7 and 8. Hydrogen peroxide penetrates into the cell and inactivates various cytoplasmic IAPs. Hydrogen peroxide also penetrates into the nucleus, fragments DNA, activates PARP and increases the transcription of genes for caspases 3, 6 and 7. Hydrogen peroxide penetrates into the endoplasmic reticulum and increases the release of active caspase 4. All of these events are critical to the induction of apoptosis. Of course, apoptosis is a cascade of several events for which the full sequence is not completely understood. However, if enough pro-apoptotic events are activated and enough antiapoptotic events are inhibited, apoptosis occurs. Nicotinamide can prevent apoptosis by interfering with the cascade of apoptotic events.86
As mentioned above, PARP and p53 bind to DNA breaks and become activated. Another protein that is activated and involved in altering gene transcription during DNA damage is cohesin.87 Cohesin is required to hold together the chromatid pairs. There is a variety of p53-mediated alterations in gene expression following DNA damage. These alterations involve activation of the forkhead transcription factor (Foxp3).88 DNA damage leads to histone activation and neovascularization, that may be critical in stroke.89 Neovascularization helps restore blood flow to brain areas that are recovering from stroke. It is not clear if neovascularization is helpful or harmful in Alzheimer’s
Table 10.1 List of genes observed to be significantly di erently expressed between t-BuOOH treated and control HCN2 cells 1 to 6 hrs following analysis.
Name of gene |
Gene ID |
Bcl2 like 11 |
NM_006538 |
TNF (ligand) superfamily, member 9 |
NM_003811 |
Caspase 4 |
NM_001225 |
Nucleolar protein 3 |
NM_003946 |
Lymphotoxin beta receptor (TNFR superfamily, member 3) |
NM_002342 |
Myeloid cell leukemia sequence (mcl-1) |
NM_021960 |
Bacculoviral IAP containing repeat 6 |
NM_016252 |
cIAP1 |
NM_001166 |
cIAP2 |
NM_001165 |
Mdm-2 |
NM_002392 |
TNFR2 |
NM_001066 |
Bcl2 like 11 is the B-cell lymphoma 2 like 11 gene also called apoptosis facilitator. TNFR is tumor necrosis factor receptor. IAP is inhibitor of apoptosis proteins. Mdm is murine double minute oncogene, a suppressor of P53 expression.
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Chapter 10 |
disease and Parkinson’s disease. Neovascularization can produce arterioles that leak until they become well established and form tight junctions between endothelial cells. Leaky arterioles may produce more damage in stroke, Alzheimer’s disease and Parkinson’s disease.
10.5 Conclusions
Neurodegeneration may be caused by or increased by toxic lifestyles. Diet and exercise improvements could be encouraged to prevent or perhaps control neurodegenerative diseases. Toxic lifestyles lead to adipokine elevations in the blood and oxygen radical formation, possibly through visfatin, CD38 and NADH oxidase mechanisms. Hydrogen peroxide formed during this process crosses cell membranes and damages DNA. The cells first damaged in this process are probably the endothelial cells of the blood-brain barrier. Adipokines cause white blood cells and platelets to stick to the damaged blood-brain barrier. This sets up an inflammatory process that produces more damage. The leaky blood-brain barrier allows the infiltration of inflammatory cells into the brain parenchyma. These inflammatory cells produce oxygen radicals that damage the DNA in neurons and other brain cells leading to brain lesions. In Alzheimer’s disease these lesions are most important in the hippocampus, cerebral cortex and other areas. In Parkinson’s disease these lesions are critical in the dopaminergic neurons of the substantia nigra, dopaminergic neuronal projections in the basal ganglia and other regions.
Stroke is a rapid process that also involves toxic lifestyles. Adipokines damage arteries in the body. Clots and thrombi are produced that lodge in the middle cerebral artery and other locations to produce ischemia, followed later by reperfusion as the clot or thrombus is removed or resolves. Ischemia and reperfusion produce oxygen radicals and hydrogen peroxide that damage cellular DNA leading to cell death through apoptosis and necrosis. Brain lesions are typically seen in the basal ganglia, hippocampus, cerebral cortex and other regions.
References
1.C. Costantini, R. Weindruch and A. Bonen, Biochem. J., 2005, 391, 51.
2.R. Cutler, J. Kelly, K. Storie, W. Pedersen, A. Tamara, K. Hatanpaa, J. Troncoso and M. Mattson, Proc. Natl. Acad. Sci. U.S.A., 2004, 101, 2070.
3.N. Rasouli and P. Kern, J. Clin. Endocrinol. Metab., 2008, 93, S64.
4.J. Beltowski, A. Jamroz-Wisniewska and S. Widomska, Cardiovasc. Hematol. Disc. Drug Targets, 2008, 8, 7.
5.C. Lyon, R. Law and W. Hsueh, Endocrinol., 2003, 144, 2195.
6.T. You and B. Nicklas, Curr. Diabetes Rep., 2008, 8, 7.
7.E. Corpeleijn, E. Feskens, E. Jansen, M. Mensink, W. Saris and E. Blaak,
Diabetes Care, 2007, 30, 3125.
DNA, Nuclear Cell Signaling and Neurodegeneration |
185 |
8.M. Rokling-Andersen, J. Reseland, M. Velerod, S. Anderssen, D. Jacobs,
P.Urdal, J. Jansson and C. Drevon, Am. J. Clin. Nutr., 2007, 86, 1293.
9.T. Kondo, I. Kobayashi and M. Murakami, Endocrine J., 2006, 53, 189.
10.K. Lee, K. Song, H. Lee, Y. Kim, S. Lee, D. Kim, W. Hwang, S. Choe,
Y.Kim and T. Kim, Obesity, 2006, 14, 423.
11.A. Pani, A. Mandas, G. Diaz, C. Abete, P. Cocco, F. Angius, A. Brundu,
N.Mucaka, M. Pais, A. Saba, L. Barberini, C. Zaru, M. Palmas, P. Putzu,
A.Mocali, F. Paoletti, P. La Colla and S. Dessi, BMC Med., 2009, 7, 66.
12.G. Razay, A. Vreugdenhil and G. Wilcock, Arch. Neurol., 2007, 64, 93.
13.I. Martins, T. Berger, M. Sharman, G. Verdile, S. Fuller and R. Martins,
J.Neurochem., 2009, 111, 1275.
14.J. Kim, J. Castellano, H. Jiang, J. Basak, M. Parsadanian, V. Pham,
S.Mason, S. Paul and D. Holtzman, Neuron, 2009, 64, 632.
15.G. Siest, P. Bertrand and B. Qin, Clin. Chem. Lab. Med., 2000, 38, 721.
16.H. Satoi, H. Tomimoto, R. Ohtani, T. Kitano, T. Kondo, M. Watanabe,
N.Oka, I. Akiguchi, S. Furuya, Y. Hirabayashi and T. Okazaki, Neurosci., 2005, 130, 657.
17.P. Katsel, C. Li and V. Haroutunian, Neurochem. Res., 2007, 32, 845.
18.L. Barrier, S. Ingrand, A. Piriou, A. Touzalin and B. Fauconneau,
Neurosci. Lett., 2005, 385, 224.
19.N. Marks, M. Berg, M. Saito and M. Saito, Brain Res., 2008, 1191, 136.
20.X. Han, D. Holtzman, D. McKeel, J. Kelley and J. Morris, J. Neurochem., 2002, 82, 809.
21.K. Hall, J. Murrell and A. Ogunniyi, Neurol., 2006, 66, 223.
22.L. Kuller, K. Margolis, S. Gaussoin, N. Bryan, D. Kerwin, M. Limacher,
S.Wassertheil-Smoller, H. Williamson and J. Robinson, J. Clin. Hypertens., 2010, 12, 203.
23.J. Burns, D. Johnson, A. Watts, R. Swerdlow and W. Brooks, Arch. Neurol., 2010, 67, 428.
24.Y. Gu, J. Nieves, Y. Stern, J. Luchsinger and N. Scarmeas, Arch. Neurol., 2010, 67, 1.
25.N. Scarmeas, Y. Stern, R. Mayeux and J. Luchsinger, Arch. Neurol., 2006, 63, 1709.
26.W. Lieb, A. Beiser, R. Vasan, Z. Tan, R. Au, T. Harris, R. Roubeno ,
S.Auerbach, C. DeCarli, P. Wolf and S. Seshadri, JAMA, 2009, 302, 2565.
27.C. Costantini, R. Weindruch, G. Della Valle and L. Puglielli, Biochem. J., 2005, 391, 59.
28.M. Grimm, H. Grimm and T. Hartmann, Trends Mol. Med., 2007, 13, 337.
29.K. Wynne, Am. J. Med., 2003, 115, 29S.
30.H. Li, P. Junk, A. Huwiler, C. Burkhardt, T. Wallerath, J. Pfeilschifter and
U.Forstermann, Circ., 2002, 106, 2250.
31.S. Chen, C. Hu, D. Yang, A. Nassief, H. Chen, K. Yin, J. Xu and C. Hsu,
Ann. N.Y. Acad. Sci., 2005, 1042, 357.
32.A. Eldreich-Epstein, L. Tran, O. Cox, E. Huang, W. Laug, H. Shimada and M. Millard, Blood, 2005, 105, 4353.